Your tree looks healthy. Always best to let the tree recover after repotting. Maintaining a high level of health is important for best results.
This example is JBP , another 12 year old from seed. Here is what happens when you cut back on a healthy group of old needles and then delay thinning the response. This branch was 3/4" indiameter, cut back to a group of three or four year old needles! Lower branch so not dominant growth pattern, but had been left for a sacrifice branch to thicken base of the trunk somewhat. Pictures from end and side. tweezers to give sense of dimension beyond my description. I should have found the time to thin the new shoots before this! But it does illustrate the response if cutting within a group of healthy needles. Healthy tree, full sun, regular care and proper nutrition. Free draining mix with pumice, lava, akadama and granite grit. Medium size particles all seived and irregular in shape! So even mix of moisture and air.